+ cd /home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/EupsBuildDir/Linux64/doxygen-1.8.13.lsst3
+ _EUPS_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771
+ . /home/agonzalez/lsst/eups/2.1.5/bin/setups.sh
++ export EUPS_SHELL=sh
++ EUPS_SHELL=sh
++ export EUPS_DIR=/home/agonzalez/lsst/eups/2.1.5
++ EUPS_DIR=/home/agonzalez/lsst/eups/2.1.5
+++ echo /home/agonzalez/lsst/eups/2.1.5
+++ sed -e 's/ /-+-/g'
++ eupslocalpath=/home/agonzalez/lsst/eups/2.1.5
+++ /home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/bin/python -E -c '
from __future__ import print_function
import sys
pp = []
for d in sys.argv[1].split(":"):
    if d and d not in pp:
        pp += [d]
if not sys.argv[2] in pp:
    pp = [sys.argv[2]] + pp
print(":".join(pp))' /home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771 /home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771
++ export EUPS_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771
++ EUPS_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771
++ _eups_path=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771
+++ /home/agonzalez/lsst/eups/2.1.5/bin/eups_setup DYLD_LIBRARY_PATH= eups -r /home/agonzalez/lsst/eups/2.1.5
++ eval export 'SETUP_EUPS='\''eups' LOCAL:/home/agonzalez/lsst/eups/2.1.5 -f Linux64 -Z '(none)'\'';' 'setup()' '{' eval '`"/home/agonzalez/lsst/eups/2.1.5/bin/eups_setup"' 'DYLD_LIBRARY_PATH="${DYLD_LIBRARY_PATH}"' '"$@"`' ';' '};' 'unsetup()' '{' eval '`"/home/agonzalez/lsst/eups/2.1.5/bin/eups_setup"' 'DYLD_LIBRARY_PATH="${DYLD_LIBRARY_PATH}"' --unsetup '"$@"`' ';' '}'
+++ export 'SETUP_EUPS=eups LOCAL:/home/agonzalez/lsst/eups/2.1.5 -f Linux64 -Z (none)'
+++ SETUP_EUPS='eups LOCAL:/home/agonzalez/lsst/eups/2.1.5 -f Linux64 -Z (none)'
++ export 'SETUP_EUPS=eups LOCAL:/home/agonzalez/lsst/eups/2.1.5 -f (none) -Z (none)'
++ SETUP_EUPS='eups LOCAL:/home/agonzalez/lsst/eups/2.1.5 -f (none) -Z (none)'
++ export EUPS_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771
++ EUPS_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771
++ unset eupslocalpath _eups_path
++ '[' X '!=' X -a -f /home/agonzalez/lsst/eups/2.1.5/etc/bash_completion.d/eups ']'
+ '[' X/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771 '!=' X ']'
+ EUPS_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771
+ tar xzvf /tmp/eups/distrib/doxygen_y0gxbotj
doxygen-1.8.13.lsst3/
doxygen-1.8.13.lsst3/ups/
doxygen-1.8.13.lsst3/ups/pkginfo
++ find . -maxdepth 1 -type d '!' -name '.*'
++ head -n 1
+ PKGDIR=./doxygen-1.8.13.lsst3
+ test '!' -z ./doxygen-1.8.13.lsst3
+ cd ./doxygen-1.8.13.lsst3
+ [[ ! -e ./ups/eupspkg ]]
+ mkdir -p ./ups
+ ln -s /home/agonzalez/lsst/eups/2.1.5/lib/eupspkg.sh ups/eupspkg
+ setup --just --type=build apr 1.5.2
++ /home/agonzalez/lsst/eups/2.1.5/bin/eups_setup DYLD_LIBRARY_PATH= --just --type=build apr 1.5.2
+ eval export 'PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/bin:/home/agonzalez/lsst/eups/2.1.5/bin:/usr/include:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/condabin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/agonzalez/.local/bin:/home/agonzalez/bin;' export 'APR_DIR=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2;' export 'SETUP_APR='\''apr' 1.5.2 -f Linux64 -Z '/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771'\'';' export 'LD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib;' export 'DYLD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib;' export LSST_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
++ export PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/bin:/home/agonzalez/lsst/eups/2.1.5/bin:/usr/include:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/condabin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/agonzalez/.local/bin:/home/agonzalez/bin
++ PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/bin:/home/agonzalez/lsst/eups/2.1.5/bin:/usr/include:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/condabin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/agonzalez/.local/bin:/home/agonzalez/bin
++ export APR_DIR=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2
++ APR_DIR=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2
++ export 'SETUP_APR=apr 1.5.2 -f Linux64 -Z /home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771'
++ SETUP_APR='apr 1.5.2 -f Linux64 -Z /home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771'
++ export LD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
++ LD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
++ export DYLD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
++ DYLD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
++ export LSST_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
++ LSST_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
+ setup --just --type=build cfitsio 3360.lsst6
++ /home/agonzalez/lsst/eups/2.1.5/bin/eups_setup DYLD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib --just --type=build cfitsio 3360.lsst6
+ eval export 'LSST_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/lib:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib;' export 'LD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/lib:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib;' export 'PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/bin:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/bin:/home/agonzalez/lsst/eups/2.1.5/bin:/usr/include:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/condabin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/agonzalez/.local/bin:/home/agonzalez/bin;' export 'DYLD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/lib:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib;' export 'CFITSIO_DIR=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6;' export 'SETUP_CFITSIO='\''cfitsio' 3360.lsst6 -f Linux64 -Z '/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771'\'''
++ export LSST_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/lib:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
++ LSST_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/lib:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
++ export LD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/lib:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
++ LD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/lib:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
++ export PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/bin:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/bin:/home/agonzalez/lsst/eups/2.1.5/bin:/usr/include:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/condabin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/agonzalez/.local/bin:/home/agonzalez/bin
++ PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/bin:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/bin:/home/agonzalez/lsst/eups/2.1.5/bin:/usr/include:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/condabin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/agonzalez/.local/bin:/home/agonzalez/bin
++ export DYLD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/lib:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
++ DYLD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/lib:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib
++ export CFITSIO_DIR=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6
++ CFITSIO_DIR=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6
++ export 'SETUP_CFITSIO=cfitsio 3360.lsst6 -f Linux64 -Z /home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771'
++ SETUP_CFITSIO='cfitsio 3360.lsst6 -f Linux64 -Z /home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771'
+ eups list -s
apr                   1.5.2      	w_2017_51 w_2017_35 firefly_2017_47 w_2020_07 w_2016_50 v13_0_rc1 w_2020_06 v15_0_rc2 w_2018_19 w_2019_48 w_2017_11 w_2016_44 sims_2_3_1 sims_2_3_3_2 sims_w_2019_40 sims_w_2019_21 w_2017_2 sims_2_3_4_1 w_2018_20 sims_w_2019_35 w_2019_01 w_2020_12 w_2019_02 sims_w_2018_47 sims_w_2020_05 w_2019_12 v12_1_rc1 w_2016_49 sims_w_2019_27 w_2017_28 w_2019_24 v17_0_rc2 w_2018_27 sims_w_2019_02 firefly_test w_2018_46 w_2018_48 sims_w_2020_09 sims_w_2018_39 sims_2_7_1 sims_w_2019_08 sims_w_2018_51 w_2016_45 w_2017_38 firefly_test_2 sims_w_2019_10 w_2019_34 w_2017_22 sims_w_2019_23 w_2017_45 sims_w_2019_28 sims_2_5_1 w_2019_52 sims_w_2019_24 w_2019_18 sims_w_2020_16 w_2016_08 sims_w_2018_45 w_2017_30 w_2017_42 w_2017_52 v18_1_0 sims_2_4_0 sims_2_11_1 v17_0 w_2017_31 w_2017_32 sims_2_10_0 v15_0_rc3 w_2019_15 sims_w_2019_03 w_2018_35 w_2019_36 w_2016_20 w_2017_17 sims_w_2019_34 sims_w_2019_50 dc1 firefly_2017_46 w_2019_33 w_2020_03 w_2019_05 w_2020_10 w_2018_37 w_2019_41 sims_w_2019_29 w_2020_08 w_2017_29 w_2017_25 sims_2_4_2_1 w_2017_41 sims_2_3_0 sims_2_13_1 w_2018_29 sims_w_2019_33 w_2018_50 current sims_2_3_7_1 v12_1_2 w_2017_13 sims_w_2018_41 sims_w_2019_36 w_2018_06 w_2018_36 w_2019_28 sims_w_2019_05 v12_1 w_2018_38 w_2017_40 w_2019_51 w_2017_26 sims_w_2018_44 w_2018_12 w_2016_53 w_2019_10 w_2019_46 w_2018_17 w_2017_37 sims_w_2020_15 w_2016_43 w_2020_11 v16_0_rc1 sims_w_2019_12 sims_2_4_2 sims_w_2019_18 v18_1_0_rc1 twinkles_2017_02_21 sims_w_2019_19 sims_w_2019_20 firefly_w_2017_31_1 w_2019_43 w_2016_15 dc1_170126 v12_0_rc1 w_2018_32 sims_w_2018_42 w_2018_15 w_2017_33 w_2018_08 sims_2_3_5 v17_0_rc1 w_2018_47 w_2019_04 w_2018_24 v16_0_rc2 w_2020_01 w_2018_31 sims_2_8_0 w_2019_29 w_2018_42 sims_w_2019_42 sims_w_2018_46 sims_w_2020_06 w_2016_42 w_2017_7 w_2016_34 w_2018_04 w_2018_05 w_2016_48 w_2017_46 w_2016_40 w_2017_39 w_2020_16 w_2016_10 v16_0 w_2019_26 w_2016_38 w_2019_44 sims_w_2020_10 w_2016_36 w_2018_21 v13_0 w_2018_28 w_2018_41 w_2017_23 w_2018_16 w_2020_05 sims_pb11 w_2017_15 twinkles w_2017_18 w_2019_14 w_2016_26 twinkles_stack w_2019_16 sims_w_2018_40 w_2018_33 w_2019_20 w_2017_21 sims_w_2018_36 w_2019_32 sims_2_3_6 w_2018_40 w_2018_23 v18_0_0_rc1 w_2018_44 test_tag w_2018_01 w_2019_11 sims_w_2019_32 w_2016_41 w_2018_39 conda_20200325 w_2019_21 sims_w_2020_12 sims_2_6_0 w_2019_09 w_2020_09 sims_w_2019_11 sims_w_2019_15 w_2017_48 sims_w_2019_09 w_2016_52 w_2016_19 w_2017_36 firefly_test_3 sims_w_2018_49 w_2019_50 w_2019_19 sims_2_3_2 w_2019_03 w_2017_6 firefly_2017_48 sims_w_2020_07 w_2017_12 v15_0_rc1 w_2018_11 w_2018_43 w_2020_02 w_2017_10 w_2017_50 twinkles_2017_02_08 w_2020_13 w_2018_13 sims_2_13_0 sims_2_7_0 sims_2_3_2_1 w_2018_03 w_2017_4 sims_2_3_7 sims_w_2018_34 w_2017_43 sims_2_3_3_3 sims_w_2020_11 w_2017_14 w_2017_9 sims_w_2018_48 v14_0_rc1 sims_w_2019_10_1 w_2016_46 sims_w_2020_14 twinkles_2017_01_05 sims w_2018_34 sims_w_2019_06 w_2018_49 w_2019_30 w_2019_06 w_2019_49 w_2016_51 w_2018_45 w_2018_26 w_2017_34 dm_22703 w_2019_45 w_2019_37 w_2017_27 w_2018_07 sims_w_2019_13 sims_w_2019_26 w_2019_23 sims_2_9_0 sims_w_2020_13 firefly_w_2017_46 conda_20200326 v14_0 v14_0_rc2 sims_w_2020_02 w_2018_18 v15_0 dax_latest v17_0_1 v12_0 w_2016_39 w_2016_32 v18_0_0 sims_2_8_2 sims_w_2019_44 w_2019_08 sims_w_2019_04 w_2018_51 w_2020_17 v12_1_2_rc1 v19_0_0_rc1 sims_w_2019_17 w_2019_25 w_2017_44 v17_0_1_rc1 w_2016_12 w_2016_35 w_2020_15 w_2019_27 w_2017_47 w_2018_22 w_2017_49 w_2019_31 sims_w_2018_52 sims_w_2019_22 w_2019_38 w_2020_04 v19_0_0 sims_w_2019_37 sims_2_4_1 sims_2_3_3_1 sims_2_11_0 w_2017_20 w_2018_02 sims_w_2019_16 sims_2_5_0 w_2019_42 sims_w_2020_04 sims_2_3_3 w_2019_13 w_2017_5 w_2018_10 w_2017_24 w_2016_37 w_2019_07 sims_w_2019_31 w_2019_17 w_2017_3 w_2017_16 w_2016_28 sims_w_2019_51 sims_2_3_4 w_2018_09 w_2019_22 sims_w_2018_50 w_2019_35 w_2019_40 w_2020_14 w_2018_25 w_2016_47 simon_test sims_w_2019_38 v12_1_1 w_2019_47 w_2017_1 sims_2_3_5_1 sims_w_2019_25 sims_2_12_0 w_2018_52 sims_w_2019_14 sims_w_2019_01 w_2018_30 w_2018_14 w_2017_8 sims_2_8_1 sims_w_2020_03 setup
cfitsio               3360.lsst6 	w_2020_07 w_2020_06 w_2019_48 sims_w_2019_40 sims_w_2019_21 sims_w_2019_35 w_2019_01 w_2020_12 w_2019_02 sims_w_2018_47 sims_w_2020_05 w_2019_12 sims_w_2019_27 w_2019_24 v17_0_rc2 sims_w_2019_02 w_2018_46 w_2018_48 sims_w_2020_09 sims_w_2019_08 sims_w_2018_51 sims_w_2019_10 w_2019_34 sims_w_2019_23 sims_w_2019_28 w_2019_52 sims_w_2019_24 w_2019_18 sims_w_2020_16 sims_w_2018_45 v18_1_0 v17_0 w_2019_15 sims_w_2019_03 w_2019_36 sims_w_2019_34 sims_w_2019_50 w_2019_33 w_2020_03 w_2019_05 w_2020_10 w_2019_41 sims_w_2019_29 w_2020_08 sims_2_13_1 sims_w_2019_33 w_2018_50 current sims_w_2018_41 sims_w_2019_36 w_2019_28 sims_w_2019_05 w_2019_51 sims_w_2018_44 w_2019_10 w_2019_46 sims_w_2020_15 w_2020_11 sims_w_2019_12 sims_w_2019_18 v18_1_0_rc1 sims_w_2019_19 sims_w_2019_20 w_2019_43 sims_w_2018_42 v17_0_rc1 w_2018_47 w_2019_04 w_2020_01 w_2019_29 w_2018_42 sims_w_2019_42 sims_w_2018_46 sims_w_2020_06 w_2020_16 w_2019_26 w_2019_44 sims_w_2020_10 w_2018_41 w_2020_05 w_2019_14 w_2019_16 sims_w_2018_40 w_2019_20 w_2019_32 w_2018_40 v18_0_0_rc1 w_2018_44 test_tag w_2019_11 sims_w_2019_32 conda_20200325 w_2019_21 sims_w_2020_12 w_2019_09 w_2020_09 sims_w_2019_11 sims_w_2019_15 sims_w_2019_09 sims_w_2018_49 w_2019_50 w_2019_19 w_2019_03 sims_w_2020_07 w_2018_43 w_2020_02 w_2020_13 sims_2_13_0 sims_w_2020_11 sims_w_2018_48 sims_w_2019_10_1 sims_w_2020_14 sims sims_w_2019_06 w_2018_49 w_2019_30 w_2019_06 w_2019_49 w_2018_45 dm_22703 w_2019_45 w_2019_37 sims_w_2019_13 sims_w_2019_26 w_2019_23 sims_w_2020_13 conda_20200326 sims_w_2020_02 dax_latest v17_0_1 v18_0_0 sims_w_2019_44 w_2019_08 sims_w_2019_04 w_2018_51 w_2020_17 v19_0_0_rc1 sims_w_2019_17 w_2019_25 v17_0_1_rc1 w_2020_15 w_2019_27 w_2019_31 sims_w_2018_52 sims_w_2019_22 w_2019_38 w_2020_04 v19_0_0 sims_w_2019_37 sims_w_2019_16 w_2019_42 sims_w_2020_04 w_2019_13 w_2019_07 sims_w_2019_31 w_2019_17 sims_w_2019_51 w_2019_22 sims_w_2018_50 w_2019_35 w_2019_40 w_2020_14 simon_test sims_w_2019_38 w_2019_47 sims_w_2019_25 w_2018_52 sims_w_2019_14 sims_w_2019_01 sims_w_2020_03 setup
+ ./ups/eupspkg FLAVOR=Linux64 VERBOSE=0 fetch
+ ./ups/eupspkg FLAVOR=Linux64 VERBOSE=0 prep
eupspkg.prep: unpacking ./upstream/doxygen-1.8.13.src.tar.gz ...
eupspkg.prep: applying ./patches/0001-protected-against-NULL-pointer.patch ...
eupspkg.prep: applying ./patches/0002-target-macos-10_9.patch ...
+ setup --type=build -k -r .
++ /home/agonzalez/lsst/eups/2.1.5/bin/eups_setup DYLD_LIBRARY_PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/lib:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/lib --type=build -k -r .
+ eval export 'PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/EupsBuildDir/Linux64/doxygen-1.8.13.lsst3/doxygen-1.8.13.lsst3/bin:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/bin:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/bin:/home/agonzalez/lsst/eups/2.1.5/bin:/usr/include:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/condabin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/agonzalez/.local/bin:/home/agonzalez/bin;' export 'DOXYGEN_DIR=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/EupsBuildDir/Linux64/doxygen-1.8.13.lsst3/doxygen-1.8.13.lsst3;' export 'SETUP_DOXYGEN='\''doxygen' LOCAL:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/EupsBuildDir/Linux64/doxygen-1.8.13.lsst3/doxygen-1.8.13.lsst3 -f Linux64 -Z '(none)'\'''
++ export PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/EupsBuildDir/Linux64/doxygen-1.8.13.lsst3/doxygen-1.8.13.lsst3/bin:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/bin:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/bin:/home/agonzalez/lsst/eups/2.1.5/bin:/usr/include:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/condabin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/agonzalez/.local/bin:/home/agonzalez/bin
++ PATH=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/EupsBuildDir/Linux64/doxygen-1.8.13.lsst3/doxygen-1.8.13.lsst3/bin:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/cfitsio/3360.lsst6/bin:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/Linux64/apr/1.5.2/bin:/home/agonzalez/lsst/eups/2.1.5/bin:/usr/include:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin:/home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/condabin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/agonzalez/.local/bin:/home/agonzalez/bin
++ export DOXYGEN_DIR=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/EupsBuildDir/Linux64/doxygen-1.8.13.lsst3/doxygen-1.8.13.lsst3
++ DOXYGEN_DIR=/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/EupsBuildDir/Linux64/doxygen-1.8.13.lsst3/doxygen-1.8.13.lsst3
++ export 'SETUP_DOXYGEN=doxygen LOCAL:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/EupsBuildDir/Linux64/doxygen-1.8.13.lsst3/doxygen-1.8.13.lsst3 -f Linux64 -Z (none)'
++ SETUP_DOXYGEN='doxygen LOCAL:/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/EupsBuildDir/Linux64/doxygen-1.8.13.lsst3/doxygen-1.8.13.lsst3 -f Linux64 -Z (none)'
+ ./ups/eupspkg FLAVOR=Linux64 VERBOSE=0 config
-- The C compiler identification is GNU 7.5.0
-- The CXX compiler identification is GNU 7.5.0
-- Check for working C compiler: /home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin/x86_64-conda_cos6-linux-gnu-cc
-- Check for working C compiler: /home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin/x86_64-conda_cos6-linux-gnu-cc - works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin/x86_64-conda_cos6-linux-gnu-c++
-- Check for working CXX compiler: /home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin/x86_64-conda_cos6-linux-gnu-c++ - works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PythonInterp: /home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/bin/python (found version "3.7.6") 
-- Found FLEX: /usr/bin/flex (found version "2.5.37") 
-- Found BISON: /usr/bin/bison (found version "3.0.4") 
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Looking for iconv_open
-- Looking for iconv_open - found
-- Performing Test ICONV_COMPILES
-- Performing Test ICONV_COMPILES - Failed
CMake Warning (dev) at /home/agonzalez/lsst/conda/miniconda3-py37_4.8.2/envs/lsst-scipipe-1a1d771/share/cmake-3.17/Modules/FindPackageHandleStandardArgs.cmake:272 (message):
  The package name passed to `find_package_handle_standard_args` (ICONV) does
  not match the name of the calling package (Iconv).  This can lead to
  problems in calling code that expects `find_package` result variables
  (e.g., `_FOUND`) to follow a certain pattern.
Call Stack (most recent call first):
  cmake/FindIconv.cmake:87 (find_package_handle_standard_args)
  CMakeLists.txt:76 (find_package)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Could NOT find ICONV (missing: ICONV_COMPILES) 
CMake Error at cmake/FindIconv.cmake:130 (MESSAGE):
  Unable to determine iconv() signature
Call Stack (most recent call first):
  CMakeLists.txt:76 (find_package)


-- Configuring incomplete, errors occurred!
See also "/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/EupsBuildDir/Linux64/doxygen-1.8.13.lsst3/doxygen-1.8.13.lsst3/CMakeFiles/CMakeOutput.log".
See also "/home/agonzalez/lsst/stack/miniconda3-py37_4.8.2-1a1d771/EupsBuildDir/Linux64/doxygen-1.8.13.lsst3/doxygen-1.8.13.lsst3/CMakeFiles/CMakeError.log".
+ exit -3