I followed the directions at https://pipelines.lsst.io/install/newinstall.html
to build LSST.
I am running Ubuntu on an old laptop.
I ran the command ‘eups distrib install -t v12_0 lsst_apps’
It executed, without error, until it reached the step 40/62 afw 12.0.
48 hours later the following was writing to console. I ran build with -vvv to obtain logs. The build.log from lsst_stack/EupsBuildDir/Linux64/afw-12.0 is attached.
Keith Smith
[ 40/62 ] afw 12.0 ... Config parameter, MANIFEST_TAGGED_URL, not set; skipping
Config parameter, MANIFEST_FLAVOR_URL, not set; skipping
Trying retrieve using MANIFEST_URL to /tmp/eups/distrib/afw_26j1xoem
Looking on server for http://sw.lsstcorp.org/eupspkg/manifests/afw-12.0.manifest
Looking for mapping for cfitsio 3360.lsst4 Linux64
Looking for mapping for doxygen 1.8.5.lsst1 Linux64
Looking for mapping for eigen 3.2.5.lsst1 Linux64
Looking for mapping for fftw 3.3.4.lsst2 Linux64
Looking for mapping for gsl 1.16.lsst3 Linux64
Looking for mapping for mariadbclient 10.1.11.lsst3 Linux64
Looking for mapping for minuit2 5.34.14 Linux64
Looking for mapping for python 0.0.4 Linux64
Looking for mapping for python_d2to1 0.2.12.lsst1 Linux64
Looking for mapping for swig 3.0.2.lsst1 Linux64
Looking for mapping for astropy 0.0.1.lsst2 Linux64
Looking for mapping for boost 1.60+1 Linux64
Looking for mapping for numpy 0.0.2+1 Linux64
Looking for mapping for python_psutil 4.1.0+1 Linux64
Looking for mapping for pyyaml 3.11.lsst1+1 Linux64
Looking for mapping for scons 2.5.0.lsst1 Linux64
Looking for mapping for stsci_distutils 0.3.7.lsst1 Linux64
Looking for mapping for wcslib 5.13.lsst1 Linux64
Looking for mapping for matplotlib 0.0.2+1 Linux64
Looking for mapping for pyfits 3.4.0+4 Linux64
Looking for mapping for sconsUtils 12.0 Linux64
Looking for mapping for base 12.0 Linux64
Looking for mapping for ndarray 12.0 Linux64
Looking for mapping for pex_exceptions 12.0 Linux64
Looking for mapping for utils 12.0 Linux64
Looking for mapping for daf_base 12.0 Linux64
Looking for mapping for pex_logging 12.0 Linux64
Looking for mapping for pex_policy 12.0 Linux64
Looking for mapping for daf_persistence 12.0 Linux64
Looking for mapping for pex_config 12.0 Linux64
Looking for mapping for afw 12.0 Linux64
Using Distrib type: eupspkg
[dl] Config parameter, EUPSPKG_TAGGED_URL, not set; skipping
Config parameter, EUPSPKG_FLAVOR_URL, not set; skipping
Trying retrieve using EUPSPKG_URL to /tmp/eups/distrib/afw_si9k_dfz
Looking on server for http://sw.lsstcorp.org/eupspkg/products/afw-12.0.eupspkg
Building package: afw-12.0.eupspkg
Building in directory: /media/ksmith/MyPassport_2/lsst_stack/EupsBuildDir/Linux64/afw-12.0
Writing log to: /media/ksmith/MyPassport_2/lsst_stack/EupsBuildDir/Linux64/afw-12.0/build.log
[build]
***** error: from /media/ksmith/MyPassport_2/lsst_stack/EupsBuildDir/Linux64/afw-12.0/build.log:
python/lsst/afw/math/statistics.i:42: Warning 504: Function lsst::afw::math::Statistics::Statistics(lsst::afw::image::Image< int > const &,lsst::afw::image::Mask< unsigned short > const &,lsst::afw::image::Image< float > const &,int const,lsst::afw::math::StatisticsControl const &) must have a return type. Ignored.
python/lsst/afw/math/statistics.i:42: Warning 504: Function lsst::afw::math::Statistics::Statistics(lsst::afw::image::Image< int > const &,lsst::afw::image::Mask< unsigned short > const &,lsst::afw::image::Image< float > const &,int const) must have a return type. Ignored.
python/lsst/afw/math/statistics.i:46: Warning 504: Function lsst::afw::math::Statistics::Statistics(lsst::afw::image::Mask< unsigned short > const &,lsst::afw::image::Mask< unsigned short > const &,lsst::afw::image::Mask< unsigned short > const &,int const,lsst::afw::math::StatisticsControl const &) must have a return type. Ignored.
python/lsst/afw/math/statistics.i:46: Warning 504: Function lsst::afw::math::Statistics::Statistics(lsst::afw::image::Mask< unsigned short > const &,lsst::afw::image::Mask< unsigned short > const &,lsst::afw::image::Mask< unsigned short > const &,int const) must have a return type. Ignored.
python/lsst/afw/math/background.i:98: Warning 504: Function lsst::afw::math::BackgroundMI::BackgroundMI(lsst::afw::image::Image< float > const &,lsst::afw::math::BackgroundControl const &) must have a return type. Ignored.
c++ -o python/lsst/afw/math/mathLib_wrap.os -c -std=c++11 -g -DLSST_LITTLE_ENDIAN=1 -O3 -fPIC -Iinclude -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/ndarray/12.0/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/pex_config/12.0/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/daf_persistence/12.0/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/pex_policy/12.0/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/pex_logging/12.0/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/daf_base/12.0/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/utils/12.0/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/pex_exceptions/12.0/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/base/12.0/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/wcslib/5.13.lsst1/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/cfitsio/3360.lsst4/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/gsl/1.16.lsst3/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/minuit2/5.34.14/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/fftw/3.3.4.lsst2/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/eigen/3.2.5.lsst1/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/mariadbclient/10.1.11.lsst3/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/boost/1.60+1/include -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/miniconda2/3.19.0.lsst4/include/python2.7 -I/media/ksmith/MyPassport_2/lsst_stack/Linux64/miniconda2/3.19.0.lsst4/lib/python2.7/site-packages/numpy/core/include python/lsst/afw/math/mathLib_wrap.cc
In file included from /media/ksmith/MyPassport_2/lsst_stack/Linux64/miniconda2/3.19.0.lsst4/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1781:0,
from /media/ksmith/MyPassport_2/lsst_stack/Linux64/miniconda2/3.19.0.lsst4/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /media/ksmith/MyPassport_2/lsst_stack/Linux64/miniconda2/3.19.0.lsst4/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from python/lsst/afw/math/mathLib_wrap.cc:4567:
/media/ksmith/MyPassport_2/lsst_stack/Linux64/miniconda2/3.19.0.lsst4/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^
c++: internal compiler error: Killed (program cc1plus)
Please submit a full bug report,
with preprocessed source if appropriate.
See <file:///usr/share/doc/gcc-4.8/README.Bugs> for instructions.
scons: *** [python/lsst/afw/image/imageLib_wrap.os] Error 4
scons: building terminated because of errors.
+ exit -4
eups distrib: Failed to build afw-12.0.eupspkg: Command:
source /media/ksmith/MyPassport_2/lsst_stack/eups/bin/setups.sh; export EUPS_PATH=/media/ksmith/MyPassport_2/lsst_stack; (/media/ksmith/MyPassport_2/lsst_stack/EupsBuildDir/Linux64/afw-12.0/build.sh) >> /media/ksmith/MyPassport_2/lsst_stack/EupsBuildDir/Linux64/afw-12.0/build.log 2>&1 4>/media/ksmith/MyPassport_2/lsst_stack/EupsBuildDir/Linux64/afw-12.0/build.msg
exited with code 252
Removing lockfile /media/ksmith/MyPassport_2/lsst_stack/.lockDir/exclusive-ksmith.19602
build.log (686.9 KB)